Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806517.1_cds_XP_016494379.1_8798
CDS Infomation

[gene=LOC107813607] [db_xref=GeneID:107813607] [protein=protein trichome birefringence-like 5] [protein_id=XP_016494379.1] [location=join(2732..3420,5139..5331,5620..5813,6158..6313,6514..6844)] [gbkey=CDS]
Sequence

ATGGCATCTTCTTCTTTACCTCCTAAGAAGAAAAACAACAACCGCTATACTCTTTCAACA
ATTTTCCTTCTCCTTTTGTTCCTCTCAAGTCTCTTCTATTTCAGCAAAAGAGCTCTTGAA
CCTAAACTCTCTCTCTACAAAGACGTCTTTTCTCAACCCCCTTCAGTATTTTCTCCAAGA
TCTGCTGATACTGAACTTCTTGATAATACACTAACAACTCCATATGGTGATACCAAAGTC
CTAAAGACAAAATCTGAGACACCCATTTTGTCAAAATCTGATTTTGATGATAGTTTGGAT
CAGAAAGTAACACCAATTTCATCAGAATTTAAAGATACTGAAGGCTTAAAAGCTTTTAAG
AAAACACCCATTTCTGATTTCAATGATAATTTAGTTGAGAAAAGCTCAGCACCTGTTTCA
TCAGAGTATGAGGATGCATCCAATGCAACAAAAAAACAAGTGGTTGATTCGGAAAGAAAT
GAGGAGAAGGTGGTCGACTCTGATTTTAAAGTAGGAGGACAAAGTTGTGATCTTTACAAG
GGAAGATGGGTGAAAGATGAGAAGCACCCAATATATAAAGCAGGGTCTTGCCCTTATGTT
GATGAGGCTTTTGATTGCCAGAGCAATGGTAGGCCTGACTCAGAGTATCTTAATTGGAGA
TGGAAGCCACATGGATGTGATCTTCCTAGGTTTAGTGCAACAGATTTTTTGAAGAGATTG
AAAGGAAAGAGGCTGATGCTGGTTGGAGACTCAATGAACCGGAACCAGTTTGAATCTCTC
CTTTGCCTTCTTCGTGAAGGCCTCGTTAATAAGAGTAAAATGTACGAGATCCATGGATAT
AAGATAACAAAAGGAAGAGGCTACTATGTTTTCAAATTTGAGGATTATAACTGCACAGTA
GAATTCGTGCGCTCTCATTTCCTTGTTAGAGAAGGAGTACGTATCAATGCTCAAGGGAAC
TCGAATCCAACTCTATCAATAGATCGCATCGACAAATCATCTAACCGTTGGAAGAAAGCT
GACATTGTGGTCTTCAATACGGGGCATTGGTGGACACATGGAAAGACTGCCAGAGGGAAA
AATTACTACAAAGAAGGTGATCATGTTTACCCTAAATTTGATGCCCTTGAAGCTTACAGG
AGAGCGTTGAAGACGTGGGCTAAGTGGATTGATGAAAATATGAGTCATGAAAAGTTGATT
ATATATCGTGGATACTCTTCAGCTCACTTCAGAGGCGGAGATTGGGATTCGGGTGGCTCC
TGTAATAAAGAGACTGAACCAGTTTCGACTGGATCCATCCTTGGTAACTACCCTTTGAAA
ATGAAGATTGTCGAGGAGGTAATCAAGGAAATGCAGCTTCCTGTTGTCCTCTTGAATGTA
ACACAGTTAACAAATTTTCGCAAGGATGGGCACCCATCAGTATATGGTAAGGTTGCTAGT
GGTGGTAGAAAGGTGAAGCAAGATTGTAGCCATTGGTGTCTCCCCGGAGTCCCTGATGCA
TGGAATGAGCTAATCTATGCCACTTTGGTCTTGCAACAACAATCATCTGTCAACCAACAA
TGA

Peptide Sequence

PEP ID

XP_016494379.1
PEP Infomation

PREDICTED: protein trichome birefringence-like 5 [Nicotiana tabacum]
Sequence

MASSSLPPKKKNNNRYTLSTIFLLLLFLSSLFYFSKRALEPKLSLYKDVFSQPPSVFSPR
SADTELLDNTLTTPYGDTKVLKTKSETPILSKSDFDDSLDQKVTPISSEFKDTEGLKAFK
KTPISDFNDNLVEKSSAPVSSEYEDASNATKKQVVDSERNEEKVVDSDFKVGGQSCDLYK
GRWVKDEKHPIYKAGSCPYVDEAFDCQSNGRPDSEYLNWRWKPHGCDLPRFSATDFLKRL
KGKRLMLVGDSMNRNQFESLLCLLREGLVNKSKMYEIHGYKITKGRGYYVFKFEDYNCTV
EFVRSHFLVREGVRINAQGNSNPTLSIDRIDKSSNRWKKADIVVFNTGHWWTHGKTARGK
NYYKEGDHVYPKFDALEAYRRALKTWAKWIDENMSHEKLIIYRGYSSAHFRGGDWDSGGS
CNKETEPVSTGSILGNYPLKMKIVEEVIKEMQLPVVLLNVTQLTNFRKDGHPSVYGKVAS
GGRKVKQDCSHWCLPGVPDAWNELIYATLVLQQQSSVNQQ

Transcript Sequence

Gene sequence data has not been registered.